BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009A01SP1|AL425954
(809 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1278 1577 0.0
>3x_Contig1278
Length = 6932
Score = 1577 bits (794), Expect = 0.0
Identities = 806/810 (99%), Gaps = 1/810 (0%)
Strand = Plus / Plus
Query: 1 gatccagacggattgagtaccagtggtagcttgaatttggccatcaccgatttgagagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5345 gatccagacggattgagtaccagtggtagcttgaatttggccatcaccgatttgagagac 5404
Query: 61 tggggcaacagtttggacgacgttagaatcctttgatgtggtttctggagcwatggtagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 5405 tggggcaacagtttggacgacgttagaatcctttgatgtggtttctggagcaatggtagt 5464
Query: 121 ggtttctggggcagctgaggaagtttctggggcagctgaggaagtttcagaactactttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5465 ggtttctggggcagctgaggaagtttctggggcagctgaggaagtttcagaactactttc 5524
Query: 181 tggagcagctgaggaagaggaagaggaaccgtcagcagagaagtctgggacaacttggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5525 tggagcagctgaggaagaggaagaggaaccgtcagcagagaagtctgggacaacttggcc 5584
Query: 241 gtcagaacctctagcagagatagcaacaggcaagctgtcactgctttcactcttagtagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5585 gtcagaacctctagcagagatagcaacaggcaagctgtcactgctttcactcttagtagc 5644
Query: 301 aaccttgtatgagctgtcttctaagacaccgtagaagccgtttttgtcagcgtaasc-aa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 5645 aaccttgtatgagctgtcttctaagacaccgtagaagccgtttttgtcagcgtaagccaa 5704
Query: 360 ataaccgctcttgatggagaaacccgtggaagcagtagattcatcagaagaagcagttag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5705 ataaccgctcttgatggagaaacccgtggaagcagtagattcatcagaagaagcagttag 5764
Query: 420 gtaaccatcgtcgccaacaacagcgtaagtgttgtcagtgaacttcaatttaccatcatc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5765 gtaaccatcgtcgccaacaacagcgtaagtgttgtcagtgaacttcaatttaccatcatc 5824
Query: 480 agtgattacaccagacaaagagtcgccactaccgaagtataaagcaccgtctttactgta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5825 agtgattacaccagacaaagagtcgccactaccgaagtataaagcaccgtctttactgta 5884
Query: 540 gacaccagcatattgcaaagcagaaccggatctgatggtgactagaccgaattgctcaga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5885 gacaccagcatattgcaaagcagaaccggatctgatggtgactagaccgaattgctcaga 5944
Query: 600 atcagcaacaatcaatttagcgaaagacaatagagcaacggaaaaggcagtagagaatct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5945 atcagcaacaatcaatttagcgaaagacaatagagcaacggaaaaggcagtagagaatct 6004
Query: 660 cattttcaaatttgataggttatgtttgtagttatagtcagttaacaaaagtttttgtta 719
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6005 cattttcaaatttgaaaggttatgtttgtagttatagtcagttaacaaaagtttttgtta 6064
Query: 720 ttggatgtctgaggttggatggtaataatataattgggtaaagagaacaagagaaggaga 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6065 ttggatgtctgaggttggatggtaataatataattgggtaaagagaacaagagaaggaga 6124
Query: 780 tattgacattaaaagttgccatgattgacg 809
||||||||||||||||||||||||||||||
Sbjct: 6125 tattgacattaaaagttgccatgattgacg 6154
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5594
Number of Sequences: 1807
Number of extensions: 5594
Number of successful extensions: 89
Number of sequences better than 1.0e-20: 1
length of query: 809
length of database: 10,358,551
effective HSP length: 16
effective length of query: 793
effective length of database: 10,329,639
effective search space: 8191403727
effective search space used: 8191403727
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)